Cheap flights from Manila to Japan from £51

This is the cheapest one-way flight price found by a momondo user in the last 72 hours by searching for a flight from Manila to Japan departing on 8/10. Fares may change, and may not be available for all flights or travel dates. Click the price to refresh the search for this deal.
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Cheap return flights

Jetstar Japan Logo
00:40 - 06:10MNL-NRT
4h 30mdirect
Jetstar Japan Logo
19:40 - 23:40NRT-MNL
5h 00mdirect
£110Jetstar Japan
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Sat, 27 Sep - Thu, 2 Oct
Jetstar Japan Logo
00:40 - 06:10MNL-NRT
4h 30mdirect
Jetstar Japan Logo
19:40 - 23:40NRT-MNL
5h 00mdirect
£113Jetstar Japan
Find Deal
Thu, 2 Oct - Fri, 10 Oct
Philippines AirAsia Logo
04:45 - 10:25MNL-NRT
4h 40mdirect
Philippines AirAsia Logo
11:25 - 15:20NRT-MNL
4h 55mdirect
£116Philippines AirAsia
Find Deal
Wed, 11 Feb - Mon, 16 Feb
Philippines AirAsia Logo
04:45 - 10:25MNL-NRT
4h 40mdirect
Philippines AirAsia Logo
16:55 - 21:15NRT-MNL
5h 20mdirect
£119Philippines AirAsia
Find Deal
Thu, 26 Feb - Mon, 2 Mar
Cathay Pacific Logo
12:30 - 21:35MNL-HND
8h 05m1 stop
Cathay Pacific Logo
10:05 - 19:10HND-MNL
10h 05m1 stop
£166Cathay Pacific
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Tue, 14 Oct - Fri, 17 Oct
Cathay Pacific Logo
08:00 - 21:35MNL-HND
12h 35m1 stop
Cathay Pacific Logo
10:05 - 19:10HND-MNL
10h 05m1 stop
£170Cathay Pacific
Find Deal
Sun, 12 Oct - Wed, 15 Oct
Philippine Airlines Logo
19:00 - 00:25MNL-HND
4h 25mdirect
Philippine Airlines Logo
01:55 - 05:40HND-MNL
4h 45mdirect
£220Philippine Airlines
Find Deal
Tue, 14 Oct - Thu, 16 Oct
Philippine Airlines Logo
19:00 - 00:20MNL-HND
4h 20mdirect
Philippine Airlines Logo
01:45 - 05:50HND-MNL
5h 05mdirect
£231Philippine Airlines
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Sun, 15 Feb - Wed, 18 Feb
Japan Airlines Logo
23:30 - 10:45MNL-ITM
10h 15m1 stop
Japan Airlines Logo
14:40 - 22:05ITM-MNL
8h 25m1 stop
£348Japan Airlines
Find Deal
Fri, 12 Dec - Wed, 17 Dec
Japan Airlines Logo
23:30 - 07:40MNL-ITM
7h 10m1 stop
Japan Airlines Logo
14:40 - 22:05ITM-MNL
8h 25m1 stop
£362Japan Airlines
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Fri, 12 Dec - Wed, 17 Dec

Jetstar Japan flights from Manila to Japan

Our best Jetstar Japan deals on Manila to Japan flight tickets
Jetstar Japan
27 Sept
MNL00:40Manila Ninoy Aquino Intl
4h 30m
NRT06:10Tokyo Narita
2 Oct
NRT19:40Tokyo Narita
5h 00m
MNL23:40Manila Ninoy Aquino Intl
Jetstar Japan
2 Oct
MNL00:40Manila Ninoy Aquino Intl
4h 30m
NRT06:10Tokyo Narita
10 Oct
NRT19:40Tokyo Narita
5h 00m
MNL23:40Manila Ninoy Aquino Intl
Jetstar Japan
28 Sept
MNL00:40Manila Ninoy Aquino Intl
4h 30m
NRT06:10Tokyo Narita
3 Oct
NRT19:40Tokyo Narita
5h 00m
MNL23:40Manila Ninoy Aquino Intl

Philippines AirAsia flights from Manila to Japan

Our best Philippines AirAsia deals on Manila to Japan flight tickets
Philippines AirAsia
11 Feb
MNL04:45Manila Ninoy Aquino Intl
4h 40m
NRT10:25Tokyo Narita
16 Feb
NRT11:25Tokyo Narita
4h 55m
MNL15:20Manila Ninoy Aquino Intl
Philippines AirAsia
26 Feb
MNL04:45Manila Ninoy Aquino Intl
4h 40m
NRT10:25Tokyo Narita
2 Mar
NRT16:55Tokyo Narita
5h 20m
MNL21:15Manila Ninoy Aquino Intl
Philippines AirAsia
4 Feb
MNL04:45Manila Ninoy Aquino Intl
4h 40m
NRT10:25Tokyo Narita
11 Feb
NRT11:25Tokyo Narita
4h 55m
MNL15:20Manila Ninoy Aquino Intl

momondo Fare Finder

 
Customise your flight search to find flights from Manila to Japan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, momondo users made 279,928 searches. Data last updated 16 September 2025.
Use the filters below to find and compare flights from Manila to Japan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Sat 27/9

00:40-06:10

Nonstop4h 30m

Tokyo Narita

Thu 2/10

19:40-23:40

Nonstop5h 00m

£110

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Thu 2/10

00:40-06:10

Nonstop4h 30m

Tokyo Narita

Fri 10/10

19:40-23:40

Nonstop5h 00m

£113

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Wed 11/2

04:45-10:25

Nonstop4h 40m

Tokyo Narita

Mon 16/2

11:25-15:20

Nonstop4h 55m

£116

ManilaTokyo

MNL - NRT

MNLNRT

Manila Ninoy Aquino Intl

Thu 26/2

04:45-10:25

Nonstop4h 40m

Tokyo Narita

Mon 2/3

16:55-21:15

Nonstop5h 20m

£119

ManilaTokyo

MNL - HND

MNLHND

Manila Ninoy Aquino Intl

Tue 14/10

12:30-21:35

1 stop8h 05m

Tokyo Haneda

Fri 17/10

10:05-19:10

1 stop10h 05m

£166

ManilaTokyo

MNL - HND

MNLHND

Manila Ninoy Aquino Intl

Sun 12/10

08:00-21:35

1 stop12h 35m

Tokyo Haneda

Wed 15/10

10:05-19:10

1 stop10h 05m

£170

ManilaTokyo

MNL - HND

MNLHND

Manila Ninoy Aquino Intl

Tue 14/10

19:00-00:25

Nonstop4h 25m

Tokyo Haneda

Thu 16/10

01:55-05:40

Nonstop4h 45m

£220

ManilaTokyo

MNL - HND

MNLHND

Manila Ninoy Aquino Intl

Sun 15/2

19:00-00:20

Nonstop4h 20m

Tokyo Haneda

Wed 18/2

01:45-05:50

Nonstop5h 05m

£231

ManilaOsaka

MNL - ITM

MNLITM

Manila Ninoy Aquino Intl

Fri 12/12

23:30-10:45

1 stop10h 15m

Osaka Itami

Wed 17/12

14:40-22:05

1 stop8h 25m

£348

ManilaOsaka

MNL - ITM

MNLITM

Manila Ninoy Aquino Intl

Fri 12/12

23:30-07:40

1 stop7h 10m

Osaka Itami

Wed 17/12

14:40-22:05

1 stop8h 25m

£362

Flights are sorted by cheapest return flights first.

Showing 1-10 of 20 resultsSorted by cheapest first
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See travel insights to Japan from

How to get the cheapest flight ticket from Manila to Japan

Look no further. We've gone through all the searches for this route on momondo so you have the important information and insights to find the cheapest flight ticket for your trip

What is the cheapest month to fly to Japan?

The cheapest month to fly to Japan from Manila is in September. Flight prices, which tend to average around £135, are often lower during this time because this is during the off-season. If you don’t want to visit Japan in September, then you should wait until June to fly from Manila, when ticket prices are also cheap, with an average price of £136.

What is the cheapest day to depart on your flight to Japan?

The cheapest day to depart from Manila to Japan is on a Wednesday when prices can be found for as low as £152. On the other hand, Friday is the most expensive day to depart from Manila because it is more convenient for both business and leisure travellers. As a result, prices tend to be around £202.

What is the cheapest time of day to depart on your flight to Japan?

Our data shows that the cheapest Manila to Japan flights are usually those with departure times in the afternoon. Our users have found flights to Japan in the afternoon for as low as £163. At midday is when there is more demand to fly to Japan, so prices are often more expensive at around £194 per ticket.

What is the cheapest Manila Ninoy Aquino Intl to Japan flight route?

Fly from Manila Ninoy Aquino Intl to Fukuoka for the best Manila Ninoy Aquino Intl - Japan flight prices

How far in advance should I book a flight to Japan?

You are more likely to see cheaper flights to Japan from Manila when booking weeks ahead of your departure date. In general, you can expect to find flights to Japan for around £163 when searching weeks before you fly. However, flight prices might be lower outside of this timeframe. For example, people recently found flights to Japan from Manila for as low as £143 on momondo.

What cabin class options are available on Manila Ninoy Aquino Intl to Japan flights?

There are 3 cabin classes available to choose from on Manila Ninoy Aquino Intl to Japan flights. Cabin price and availability will vary by airline so perform a search above to find the right deals for you.

Can stopping save me money on Manila to Japan flights?

No. A direct flight is the cheapest option for a flight between Manila to Japan.

Cheap Manila to Japan flight deals and tips

Find info about flight duration, direct flights, and airports for your flight from Manila to Japan

Best price found

£48

Fastest flight time

3h 55m

Direct flights

Every day

Airports in Japan

2 airports
The best one-way flight to Japan from Manila in the past 72 hours is £48. The best return flight deal from Manila to Japan found on momondo in the last 72 hours is £114.
The fastest flight from Manila to Japan takes 3h 55m
Direct flights go from Manila to Japan every day.
There are 2 airports near Japan: Tokyo Narita (NRT), Tokyo Haneda (HND)
  • When did momondo last update prices for flights from Manila Ninoy Aquino Intl Airport to Japan?

    Prices for flights from Manila Ninoy Aquino Intl Airport to Japan are updated daily.

  • How many operators does momondo search for flights from Manila Ninoy Aquino Intl Airport to Japan?

  • How old do you have to be to fly from Manila Ninoy Aquino Intl Airport to Japan?

    The minimum age for a child to fly alone is five, but airlines that offer an unaccompanied minor (UNMR) service may have their own age limitations. Flight duration, scheduling, and layovers are among the considerations that may influence age limits. We recommend that you double-check with the airline you are booking with for travel from Manila Ninoy Aquino Intl Airport to Japan.

  • What documentation or ID do you need to fly to Japan?

    The necessary travel and health documents for your Japan trip may vary depending on your travel plans and individual circumstances. Generally, you should have various documents, such as a national ID card or driver's license and a passport that is valid for six months beyond your scheduled arrival date. We recommend seeking advice from your airline or a trusted third party, such as IATA.

  • What is the most popular plane model from Manila to Japan?

Best airlines flying from Manila to Japan

Compare and see reviews for airlines that fly from Manila to Japan with momondo
Airline
Rating
Free Cancellation
Price
Cebu PacificPriceFrom £94Free CancellationRating
6.8
201 reviews
Search Cebu Pacific flights
Philippines AirAsiaPriceFrom £112Free CancellationRating
6.6
113 reviews
Search Philippines AirAsia flights
Jetstar JapanPriceFrom £114Free CancellationRating
7.5
56 reviews
Search Jetstar Japan flights
Jetstar AsiaPriceFrom £129Free CancellationRating
6.7
58 reviews
Search Jetstar Asia flights
Philippine AirlinesPriceFrom £134Free CancellationRating
7.2
911 reviews
Search Philippine Airlines flights
ZIPAIRPriceFrom £164Free CancellationRating
7.6
49 reviews
Search ZIPAIR flights
Cathay PacificPriceFrom £175Free CancellationRating
7.6
993 reviews
Search Cathay Pacific flights
Japan AirlinesPriceFrom £230Free CancellationRating
8.3
1,559 reviews
Search Japan Airlines flights
ANAPriceFrom £233Free CancellationRating
8.4
961 reviews
Search ANA flights
Shenzhen AirlinesPriceFrom £256Free CancellationRating
7.5
20 reviews
Search Shenzhen Airlines flights

Why use momondo?

Why should I use momondo to find a flight deal from Manila to Japan?

momondo collates all your flight options in one place and lets you filter them to find the perfect flight from Manila to Japan. momondo saves you time and could save you money on your trip.

Can I find flights from Manila to Japan with flexible booking policies on momondo?

Yes. momondo allows you to filter the results for Manila to Japan flights to just show those with flexible booking policies.

How can momondo help me find flights from Manila to Japan?

Once all potential Manila to Japan flight options are in front of you, momondo lets you sort and filter flights based on preferences such as airline, price and flight times amongst many other options.

I’m not ready to book a flight from Manila to Japan right now. Can momondo alert me if prices change?

Yes. momondo can track prices for Manila to Japan flights and alert you when they change. Perform a search to set up the price alert. All that is required is a valid email address.

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1 adult
Thu 16/10
Thu 23/10

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Popular Cities in Japan

Popular flights according to clicks in the last 7 days on momondo